Ammonia Oxidation Versus Heterotrophy in Crenarchaeota Populations from Marine Environments West of the Antarctic Peninsula


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Resource Abstract:
Abstract: Ammonia oxidation is the first step in the conversion of regenerated nitrogen to dinitrogen gas, a 3-step pathway mediated by 3 distinct guilds of bacteria and archaea. Ammonia oxidation and the overall process of nitrification-denitrification have received relatively little attention in polar oceans where the effects of climate change on biogeochemical rates are likely to be pronounced. Previous work on Ammonia Oxidizing Archaea (AOA) in the Palmer LTER study area West of the Antarctic Peninsula (WAP), has suggested strong vertical segregation of crenarchaeote metabolism, with the 'winter water' (WW, ~50-100 m depth range) dominated by non-AOA crenarchaeotes, while Crenarchaeota populations in the 'circumpolar deep water' (CDW), which lies immediately below the winter water (150-3500 m), are dominated by AOA. Analysis of a limited number of samples from the Arctic Ocean did not reveal a comparable vertical segregation of AOA, and suggested that AOA and Crenarchaeota abundance is much lower there than in the Antarctic. These findings led to 3 hypotheses that will be tested in this project: 1) the apparent low abundance of Crenarchaeota and AOA in Arctic Ocean samples may be due to spatial or temporal variability in populations; 2) the WW population of Crenarchaeota in the WAP is dominated by a heterotroph; 3) the WW population of Crenarchaeota in the WAP 'grows in' during spring and summer after this water mass forms. The study will contribute substantially to understanding an important aspect of the nitrogen cycle in the Palmer LTER (Long Term Ecological Research) study area by providing insights into the ecology and physiology of AOA. The natural segregation of crenarchaeote phenotypes in waters of the WAP, coupled with metagenomic studies in progress in the same area by others (A. Murray, H. Ducklow), offers the possibility of major breakthroughs in understanding of the metabolic capabilities of these organisms. This knowledge is needed to model how water column nitrification will respond to changes in polar ecosystems accompanying global climate change. The Principal Investigator will participate fully in the education and outreach efforts of the Palmer LTER, including making highlights of our findings available for posting to their project web site and participating in outreach (for example, Schoolyard LTER). The research also will involve undergraduates (including the field work if possible) and will support high school interns in the P.I.'s laboratory over the summer.
Citation
Title  Ammonia Oxidation Versus Heterotrophy in Crenarchaeota Populations from Marine Environments West of the Antarctic Peninsula
publication date 2014
cited responsible party - author
individual Name  Hollibaugh, James T.
organisation Name  The University of Georgia, Athens, GA, 30602, US
Contact information
Postal Address:
electronic Mail Address: aquadoc@uga.edu
Linkage for online resource
URL: http://orcid.org/ORCID:0000-0001-8037-160X
protocol  ORCID
cited responsible party - publisher
organisation Name  U.S. Antarctic Program (USAP) Data Center
No contact information provided.
Topic Category:   geoscientificInformation
Keywords:
Resource language:   eng
Resource progress code:   Complete
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Creative Commons Attribution-NonCommercial-Share Alike 3.0 United States [CC BY-NC-SA 3.0]
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Access Constraints   license
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Creative Commons Attribution-NonCommercial-Share Alike 3.0 United States [CC BY-NC-SA 3.0]
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Classification  unclassified
Resource extent
Geographic Extent
Geographic Bounding Box
westBoundLongitude  -79
eastBoundLongitude  -64
northBoundLatitude  -63
southBoundLatitude  -71
Resource extent
Temporal Extent
2009-08-15 2013-12-31
Credits:
funderName:NSF:GEO:PLR:Antarctic Organisms and Ecosystems awardNumber:0838996 awardTitle:Ammonia Oxidation Versus Heterotrophy in Crenarchaeota Populations from Marine Environments West of the Antarctic Peninsula
point of contact - pointOfContact
individual Name  Hollibaugh, James T.
organisation Name  The University of Georgia, Athens, GA, 30602, US
Contact information
No address provided.
Linkage for online resource
URL: http://orcid.org/ORCID:0000-0001-8037-160X
protocol  ORCID
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name  Landing Page
URL: http://dx.doi.org/10.15784/600105
protocol  WWW:LINK-1.0-http--link
link function  information
Description  Link to DOI landing page or data facility landing page if no DOI is assigned.
Linkage for online resource
name  landing page
URL: http://www.usap-dc.org/view/dataset/600105
protocol  WWW:LINK-1.0-http--link
link function  information
Description  Link to a web page related to the resource.
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Metadata Information

Metadata data stamp:  2018-05-17
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notes:  This metadata record was generated by an xslt transformation from a DataCite metadata record; The transform was created by Damian Ulbricht and Stephen M. Richard. 2017-11-15 these records include new IEDA keywords for geoportal facets Run on 2018-06-21T19:05:24-07:00
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organisation Name  Interdisciplinary Earth Data Alliance
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electronic Mail Address: web@usap-dc.org
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URL: http://www.usap-dc.org/static/imgs/header/usaplogo.png
link function  browseGraphic
Metadata scope code  dataset
Metadata hierarchy level name:  Dataset
Metadata language   eng
Metadata character set encoding:   utf8
Metadata standard for this record:  ISO 19139 Geographic Information - Metadata - Implementation Specification
standard version:  2007
Metadata record identifier:  urn:ieda:metadataabout:10.15784-600105
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Metadata record format is ISO19139 XML (MD_Metadata)